Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 KRT18P32-201ENST00000424695 1287 ntBASIC17.48■□□□□ 0.39
PDE6CP51160 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.48■□□□□ 0.39
PDE6CP51160 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
PDE6CP51160 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.48■□□□□ 0.39
PDE6CP51160 AC067863.1-201ENST00000494933 530 ntBASIC17.48■□□□□ 0.39
PDE6CP51160 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.48■□□□□ 0.39
PDE6CP51160 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PDE6CP51160 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.48■□□□□ 0.39
PDE6CP51160 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 AC243562.1-201ENST00000560672 389 ntBASIC17.48■□□□□ 0.39
PDE6CP51160 AC093028.1-201ENST00000622998 982 ntBASIC17.48■□□□□ 0.39
PDE6CP51160 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDE6CP51160 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PDE6CP51160 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.48■□□□□ 0.39
PDE6CP51160 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.48■□□□□ 0.39
PDE6CP51160 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6CP51160 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDE6CP51160 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDE6CP51160 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
PDE6CP51160 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
PDE6CP51160 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.47■□□□□ 0.39
PDE6CP51160 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.47■□□□□ 0.39
PDE6CP51160 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PDE6CP51160 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDE6CP51160 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6CP51160 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6CP51160 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 AC010491.1-201ENST00000563101 2797 ntBASIC17.46■□□□□ 0.39
PDE6CP51160 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PDE6CP51160 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PDE6CP51160 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PDE6CP51160 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
PDE6CP51160 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 AL139400.1-201ENST00000366220 510 ntBASIC17.46■□□□□ 0.39
PDE6CP51160 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 FAM86GP-201ENST00000448322 971 ntBASIC17.46■□□□□ 0.39
PDE6CP51160 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 PRYP6-201ENST00000514804 343 ntBASIC17.46■□□□□ 0.39
PDE6CP51160 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6CP51160 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6CP51160 AC015911.4-201ENST00000588022 1070 ntBASIC17.46■□□□□ 0.39
PDE6CP51160 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.46■□□□□ 0.39
PDE6CP51160 AC106028.4-201ENST00000614509 607 ntBASIC17.46■□□□□ 0.39
PDE6CP51160 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PDE6CP51160 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6CP51160 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6CP51160 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
PDE6CP51160 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms