Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
SLC1A1P43005 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC1A1P43005 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC1A1P43005 AC106730.1-201ENST00000566722 1090 ntBASIC16.89■□□□□ 0.29
SLC1A1P43005 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC1A1P43005 FAM197Y3-203ENST00000618346 717 ntBASIC16.89■□□□□ 0.29
SLC1A1P43005 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC1A1P43005 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC1A1P43005 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC1A1P43005 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC1A1P43005 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
SLC1A1P43005 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC1A1P43005 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
SLC1A1P43005 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
SLC1A1P43005 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 FDX1P1-201ENST00000449115 551 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 KRT18P3-201ENST00000451602 1288 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC1A1P43005 FAM86C2P-203ENST00000528684 1004 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC1A1P43005 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC1A1P43005 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC1A1P43005 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC1A1P43005 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC1A1P43005 AC008267.7-201ENST00000624570 1194 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
SLC1A1P43005 AC092865.6-201ENST00000642101 219 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
SLC1A1P43005 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC1A1P43005 PPT1-215ENST00000641471 2368 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC1A1P43005 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC1A1P43005 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC1A1P43005 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC1A1P43005 AC013268.4-201ENST00000637413 2228 ntBASIC16.88■□□□□ 0.29
SLC1A1P43005 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC1A1P43005 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC1A1P43005 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
SLC1A1P43005 AL691432.1-201ENST00000596308 1422 ntBASIC16.87■□□□□ 0.29
SLC1A1P43005 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC1A1P43005 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
SLC1A1P43005 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC1A1P43005 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLC1A1P43005 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 AL513477.1-201ENST00000602865 2407 ntBASIC16.87■□□□□ 0.29
SLC1A1P43005 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 AP003680.1-201ENST00000598970 3660 ntBASIC16.87■□□□□ 0.29
SLC1A1P43005 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC1A1P43005 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLC1A1P43005 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC1A1P43005 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC1A1P43005 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC1A1P43005 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 MED15P5-201ENST00000423150 992 ntBASIC16.87■□□□□ 0.29
SLC1A1P43005 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.87■□□□□ 0.29
SLC1A1P43005 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC1A1P43005 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.87■□□□□ 0.29
SLC1A1P43005 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms