Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
CXCL5P42830 AL805961.1-202ENST00000641562 540 ntBASIC10.96□□□□□ -0.65
CXCL5P42830 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC10.96□□□□□ -0.66
CXCL5P42830 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.66
CXCL5P42830 AC010491.1-201ENST00000563101 2797 ntBASIC10.96□□□□□ -0.66
CXCL5P42830 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC10.96□□□□□ -0.66
CXCL5P42830 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC10.96□□□□□ -0.66
CXCL5P42830 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC10.96□□□□□ -0.66
CXCL5P42830 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
CXCL5P42830 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
CXCL5P42830 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 AC112504.1-201ENST00000623415 1841 ntBASIC10.95□□□□□ -0.66
CXCL5P42830 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 AL592424.1-201ENST00000563624 1536 ntBASIC10.95□□□□□ -0.66
CXCL5P42830 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 IER3-202ENST00000376377 1350 ntBASIC10.95□□□□□ -0.66
CXCL5P42830 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 MED16-201ENST00000269814 1199 ntTSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.95□□□□□ -0.66
CXCL5P42830 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC10.95□□□□□ -0.66
CXCL5P42830 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 USP31-203ENST00000567975 2142 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC10.95□□□□□ -0.66
CXCL5P42830 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
CXCL5P42830 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
CXCL5P42830 AC005252.3-201ENST00000623855 2258 ntBASIC10.95□□□□□ -0.66
CXCL5P42830 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.95□□□□□ -0.66
CXCL5P42830 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC10.94□□□□□ -0.66
CXCL5P42830 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC10.94□□□□□ -0.66
CXCL5P42830 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
CXCL5P42830 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CXCL5P42830 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.94□□□□□ -0.66
CXCL5P42830 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
CXCL5P42830 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
CXCL5P42830 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC10.94□□□□□ -0.66
CXCL5P42830 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC10.94□□□□□ -0.66
CXCL5P42830 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC10.94□□□□□ -0.66
CXCL5P42830 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
CXCL5P42830 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
CXCL5P42830 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
CXCL5P42830 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms