Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TNFSF9P41273 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFSF9P41273 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFSF9P41273 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFSF9P41273 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 AC236430.1-201ENST00000402231 743 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.38■□□□□ 0.37
TNFSF9P41273 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFSF9P41273 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFSF9P41273 SERBP1P3-201ENST00000459980 809 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFSF9P41273 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFSF9P41273 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFSF9P41273 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFSF9P41273 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.38■□□□□ 0.37
TNFSF9P41273 RN7SL204P-201ENST00000582831 262 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.38■□□□□ 0.37
TNFSF9P41273 AC092364.2-202ENST00000597012 1073 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFSF9P41273 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.38■□□□□ 0.37
TNFSF9P41273 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 REXO1L1P-202ENST00000608646 1974 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 PCDHA1-201ENST00000378133 2726 ntBASIC17.38■□□□□ 0.37
TNFSF9P41273 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TNFSF9P41273 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.38■□□□□ 0.37
TNFSF9P41273 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TNFSF9P41273 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.37■□□□□ 0.37
TNFSF9P41273 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TNFSF9P41273 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.37■□□□□ 0.37
TNFSF9P41273 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 SPDYE18-201ENST00000510091 1050 ntBASIC17.37■□□□□ 0.37
TNFSF9P41273 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.37■□□□□ 0.37
TNFSF9P41273 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.37■□□□□ 0.37
TNFSF9P41273 AC004790.1-201ENST00000612686 536 ntBASIC17.37■□□□□ 0.37
TNFSF9P41273 MIR6069-201ENST00000620069 79 ntBASIC17.37■□□□□ 0.37
TNFSF9P41273 AL109936.8-201ENST00000641772 604 ntBASIC17.37■□□□□ 0.37
TNFSF9P41273 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TNFSF9P41273 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.37■□□□□ 0.37
TNFSF9P41273 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TNFSF9P41273 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TNFSF9P41273 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TNFSF9P41273 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.37■□□□□ 0.37
TNFSF9P41273 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TNFSF9P41273 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TNFSF9P41273 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TNFSF9P41273 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.36■□□□□ 0.37
TNFSF9P41273 FO393414.2-201ENST00000405153 598 ntBASIC17.36■□□□□ 0.37
TNFSF9P41273 AC002472.2-201ENST00000442739 958 ntBASIC17.36■□□□□ 0.37
TNFSF9P41273 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.36■□□□□ 0.37
TNFSF9P41273 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.36■□□□□ 0.37
TNFSF9P41273 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TNFSF9P41273 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.36■□□□□ 0.37
TNFSF9P41273 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms