Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AC008267.7-201ENST00000624570 1194 ntBASIC16.37■□□□□ 0.21
HADHAP40939 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.37■□□□□ 0.21
HADHAP40939 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HADHAP40939 AL596257.1-201ENST00000641463 2694 ntBASIC16.37■□□□□ 0.21
HADHAP40939 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 ELL2P1-201ENST00000413990 1906 ntBASIC16.37■□□□□ 0.21
HADHAP40939 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.37■□□□□ 0.21
HADHAP40939 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HADHAP40939 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.37■□□□□ 0.21
HADHAP40939 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.36■□□□□ 0.21
HADHAP40939 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.36■□□□□ 0.21
HADHAP40939 AC073389.1-201ENST00000595595 795 ntBASIC16.36■□□□□ 0.21
HADHAP40939 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.36■□□□□ 0.21
HADHAP40939 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.36■□□□□ 0.21
HADHAP40939 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.36■□□□□ 0.21
HADHAP40939 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.36■□□□□ 0.21
HADHAP40939 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.36■□□□□ 0.21
HADHAP40939 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 AC007326.2-201ENST00000624224 7579 ntBASIC16.36■□□□□ 0.21
HADHAP40939 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
HADHAP40939 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HADHAP40939 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
HADHAP40939 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC16.35■□□□□ 0.21
HADHAP40939 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 UPF3AP3-201ENST00000420996 769 ntBASIC16.35■□□□□ 0.21
HADHAP40939 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.35■□□□□ 0.21
HADHAP40939 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.35■□□□□ 0.21
HADHAP40939 ALG1L5P-201ENST00000482043 771 ntBASIC16.35■□□□□ 0.21
HADHAP40939 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
HADHAP40939 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.35■□□□□ 0.21
HADHAP40939 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.35■□□□□ 0.21
HADHAP40939 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.35■□□□□ 0.21
HADHAP40939 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
HADHAP40939 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.35■□□□□ 0.21
HADHAP40939 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.35■□□□□ 0.21
HADHAP40939 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
HADHAP40939 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.35■□□□□ 0.21
HADHAP40939 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.35■□□□□ 0.21
HADHAP40939 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HADHAP40939 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.35■□□□□ 0.21
HADHAP40939 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.35■□□□□ 0.21
HADHAP40939 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HADHAP40939 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HADHAP40939 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HADHAP40939 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
HADHAP40939 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.34■□□□□ 0.21
HADHAP40939 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HADHAP40939 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms