Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
COL15A1P39059 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.21■□□□□ 0.83
COL15A1P39059 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL15A1P39059 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 KRT8P44-201ENST00000441609 1350 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 RPL7P3-201ENST00000441388 714 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 FO681548.1-201ENST00000455617 1132 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 RNA5SP412-201ENST00000516234 123 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.21■□□□□ 0.83
COL15A1P39059 PTP4A1P2-201ENST00000546033 454 ntBASIC20.21■□□□□ 0.83
COL15A1P39059 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
COL15A1P39059 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.21■□□□□ 0.83
COL15A1P39059 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL15A1P39059 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL15A1P39059 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.2■□□□□ 0.82
COL15A1P39059 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL15A1P39059 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.2■□□□□ 0.82
COL15A1P39059 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.2■□□□□ 0.82
COL15A1P39059 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
COL15A1P39059 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.2■□□□□ 0.82
COL15A1P39059 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.2■□□□□ 0.82
COL15A1P39059 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
COL15A1P39059 AC245100.3-201ENST00000441281 285 ntBASIC20.2■□□□□ 0.82
COL15A1P39059 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL15A1P39059 SLED1-202ENST00000512051 380 ntBASIC20.2■□□□□ 0.82
COL15A1P39059 AC120045.2-201ENST00000567334 178 ntBASIC20.2■□□□□ 0.82
COL15A1P39059 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC20.2■□□□□ 0.82
COL15A1P39059 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC20.2■□□□□ 0.82
COL15A1P39059 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
COL15A1P39059 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.2■□□□□ 0.82
COL15A1P39059 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 AC005052.1-201ENST00000625181 2492 ntBASIC20.19■□□□□ 0.82
COL15A1P39059 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
COL15A1P39059 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC20.19■□□□□ 0.82
COL15A1P39059 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
COL15A1P39059 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.19■□□□□ 0.82
COL15A1P39059 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.19■□□□□ 0.82
COL15A1P39059 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 AC134915.1-201ENST00000426461 574 ntBASIC20.19■□□□□ 0.82
COL15A1P39059 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC20.19■□□□□ 0.82
COL15A1P39059 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC20.19■□□□□ 0.82
COL15A1P39059 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC20.19■□□□□ 0.82
COL15A1P39059 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.19■□□□□ 0.82
COL15A1P39059 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL15A1P39059 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC20.19■□□□□ 0.82
COL15A1P39059 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
COL15A1P39059 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms