Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP6V1AP38606 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP6V1AP38606 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AC090340.1-201ENST00000620778 4980 ntBASIC20.34■□□□□ 0.85
ATP6V1AP38606 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 GPAA1P2-201ENST00000417923 928 ntBASIC20.34■□□□□ 0.85
ATP6V1AP38606 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 RN7SL560P-201ENST00000577943 264 ntBASIC20.34■□□□□ 0.85
ATP6V1AP38606 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 RHOXF1P1-202ENST00000635473 501 ntBASIC20.34■□□□□ 0.85
ATP6V1AP38606 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AC078925.2-201ENST00000624013 1973 ntBASIC20.34■□□□□ 0.85
ATP6V1AP38606 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.34■□□□□ 0.85
ATP6V1AP38606 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATP6V1AP38606 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 KRT90P-201ENST00000549264 1064 ntBASIC20.33■□□□□ 0.85
ATP6V1AP38606 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP6V1AP38606 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP6V1AP38606 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V1AP38606 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V1AP38606 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V1AP38606 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V1AP38606 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V1AP38606 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP6V1AP38606 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
ATP6V1AP38606 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms