Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
COPB2P35606 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.37■□□□□ 0.53
COPB2P35606 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
COPB2P35606 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
COPB2P35606 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 AC008894.3-201ENST00000624324 3103 ntBASIC18.36■□□□□ 0.53
COPB2P35606 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
COPB2P35606 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
COPB2P35606 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.36■□□□□ 0.53
COPB2P35606 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC18.36■□□□□ 0.53
COPB2P35606 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
COPB2P35606 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.36■□□□□ 0.53
COPB2P35606 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC18.36■□□□□ 0.53
COPB2P35606 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COPB2P35606 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.36■□□□□ 0.53
COPB2P35606 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC18.36■□□□□ 0.53
COPB2P35606 KRT8P37-201ENST00000451609 1420 ntBASIC18.36■□□□□ 0.53
COPB2P35606 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.36■□□□□ 0.53
COPB2P35606 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
COPB2P35606 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.36■□□□□ 0.53
COPB2P35606 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC18.36■□□□□ 0.53
COPB2P35606 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.36■□□□□ 0.53
COPB2P35606 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.36■□□□□ 0.53
COPB2P35606 AC036164.1-201ENST00000570544 333 ntBASIC18.36■□□□□ 0.53
COPB2P35606 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC18.36■□□□□ 0.53
COPB2P35606 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
COPB2P35606 WFDC1-204ENST00000613603 549 ntBASIC18.36■□□□□ 0.53
COPB2P35606 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.36■□□□□ 0.53
COPB2P35606 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC18.36■□□□□ 0.53
COPB2P35606 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
COPB2P35606 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 PCDHA14-201ENST00000506751 2298 ntBASIC18.35■□□□□ 0.53
COPB2P35606 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 AC098850.1-201ENST00000419919 790 ntBASIC18.35■□□□□ 0.53
COPB2P35606 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC18.35■□□□□ 0.53
COPB2P35606 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 FLJ38576-201ENST00000623820 2459 ntBASIC18.35■□□□□ 0.53
COPB2P35606 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.35■□□□□ 0.53
COPB2P35606 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
COPB2P35606 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
COPB2P35606 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 CLK3P2-201ENST00000427566 1453 ntBASIC18.34■□□□□ 0.53
COPB2P35606 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.34■□□□□ 0.53
COPB2P35606 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
COPB2P35606 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
COPB2P35606 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 AC112492.5-201ENST00000421897 457 ntBASIC18.34■□□□□ 0.53
COPB2P35606 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
COPB2P35606 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC18.34■□□□□ 0.53
COPB2P35606 AC092552.1-201ENST00000547243 906 ntBASIC18.34■□□□□ 0.53
COPB2P35606 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.34■□□□□ 0.53
COPB2P35606 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
COPB2P35606 AL033527.5-201ENST00000641382 801 ntBASIC18.34■□□□□ 0.53
COPB2P35606 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms