Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.37■□□□□ 0.21
RPA3P35244 AL022342.1-201ENST00000400363 863 ntBASIC16.37■□□□□ 0.21
RPA3P35244 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.37■□□□□ 0.21
RPA3P35244 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.37■□□□□ 0.21
RPA3P35244 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.37■□□□□ 0.21
RPA3P35244 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RPA3P35244 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.37■□□□□ 0.21
RPA3P35244 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.37■□□□□ 0.21
RPA3P35244 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RPA3P35244 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.37■□□□□ 0.21
RPA3P35244 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
RPA3P35244 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.37■□□□□ 0.21
RPA3P35244 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.37■□□□□ 0.21
RPA3P35244 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
RPA3P35244 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
RPA3P35244 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RPA3P35244 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RPA3P35244 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.36■□□□□ 0.21
RPA3P35244 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RPA3P35244 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RPA3P35244 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RPA3P35244 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.36■□□□□ 0.21
RPA3P35244 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 AC107918.2-201ENST00000530817 355 ntBASIC16.36■□□□□ 0.21
RPA3P35244 AC087641.1-201ENST00000557561 1021 ntBASIC16.36■□□□□ 0.21
RPA3P35244 AC106730.1-201ENST00000566722 1090 ntBASIC16.36■□□□□ 0.21
RPA3P35244 OR7E47P-204ENST00000575924 449 ntBASIC16.36■□□□□ 0.21
RPA3P35244 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.36■□□□□ 0.21
RPA3P35244 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.36■□□□□ 0.21
RPA3P35244 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
RPA3P35244 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.36■□□□□ 0.21
RPA3P35244 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RPA3P35244 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC16.36■□□□□ 0.21
RPA3P35244 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 AC008677.1-201ENST00000519230 1561 ntBASIC16.35■□□□□ 0.21
RPA3P35244 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 CICP13-201ENST00000422015 2789 ntBASIC16.35■□□□□ 0.21
RPA3P35244 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RPA3P35244 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 AC007967.2-201ENST00000432613 625 ntBASIC16.35■□□□□ 0.21
RPA3P35244 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.35■□□□□ 0.21
RPA3P35244 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.35■□□□□ 0.21
RPA3P35244 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.35■□□□□ 0.21
RPA3P35244 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 TMBIM7P-203ENST00000641617 1718 ntBASIC16.35■□□□□ 0.21
RPA3P35244 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.35■□□□□ 0.21
RPA3P35244 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RPA3P35244 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms