Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.95■□□□□ 0.14
VARSP26640 PMS2P4-201ENST00000412466 1052 ntBASIC15.95■□□□□ 0.14
VARSP26640 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 AC140658.5-201ENST00000438532 169 ntBASIC15.95■□□□□ 0.14
VARSP26640 CEND1P1-201ENST00000451006 455 ntBASIC15.95■□□□□ 0.14
VARSP26640 AC074386.1-202ENST00000463561 864 ntBASIC15.95■□□□□ 0.14
VARSP26640 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.95■□□□□ 0.14
VARSP26640 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.95■□□□□ 0.14
VARSP26640 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
VARSP26640 MIR3909-201ENST00000579518 119 ntBASIC15.95■□□□□ 0.14
VARSP26640 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.95■□□□□ 0.14
VARSP26640 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.95■□□□□ 0.14
VARSP26640 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.95■□□□□ 0.14
VARSP26640 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
VARSP26640 AC006449.6-201ENST00000612330 2296 ntBASIC15.94■□□□□ 0.14
VARSP26640 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
VARSP26640 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 LINC01144-201ENST00000626198 1710 ntBASIC15.94■□□□□ 0.14
VARSP26640 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 MIR770-201ENST00000390219 98 ntBASIC15.94■□□□□ 0.14
VARSP26640 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
VARSP26640 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.94■□□□□ 0.14
VARSP26640 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.94■□□□□ 0.14
VARSP26640 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC15.94■□□□□ 0.14
VARSP26640 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.94■□□□□ 0.14
VARSP26640 AC020765.3-201ENST00000613051 740 ntBASIC15.94■□□□□ 0.14
VARSP26640 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.94■□□□□ 0.14
VARSP26640 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.94■□□□□ 0.14
VARSP26640 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.94■□□□□ 0.14
VARSP26640 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.94■□□□□ 0.14
VARSP26640 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VARSP26640 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 AL603832.2-201ENST00000566195 2125 ntBASIC15.94■□□□□ 0.14
VARSP26640 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
VARSP26640 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VARSP26640 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.94■□□□□ 0.14
VARSP26640 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
VARSP26640 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
VARSP26640 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.93■□□□□ 0.14
VARSP26640 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.93■□□□□ 0.14
VARSP26640 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.93■□□□□ 0.14
VARSP26640 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.93■□□□□ 0.14
VARSP26640 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
VARSP26640 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.93■□□□□ 0.14
VARSP26640 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.93■□□□□ 0.14
VARSP26640 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.93■□□□□ 0.14
VARSP26640 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.93■□□□□ 0.14
VARSP26640 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 AP000344.2-201ENST00000512987 629 ntBASIC15.93■□□□□ 0.14
VARSP26640 AC109635.5-201ENST00000533593 962 ntBASIC15.93■□□□□ 0.14
VARSP26640 AC068137.2-201ENST00000605408 478 ntBASIC15.93■□□□□ 0.14
VARSP26640 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
VARSP26640 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms