Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
COL8A2P25067 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.63□□□□□ -0.23
COL8A2P25067 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.63□□□□□ -0.23
COL8A2P25067 AL080243.2-201ENST00000418783 582 ntBASIC13.63□□□□□ -0.23
COL8A2P25067 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.63□□□□□ -0.23
COL8A2P25067 TAF8-206ENST00000472818 719 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
COL8A2P25067 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.63□□□□□ -0.23
COL8A2P25067 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
COL8A2P25067 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.63□□□□□ -0.23
COL8A2P25067 MIR4321-201ENST00000592276 80 ntBASIC13.63□□□□□ -0.23
COL8A2P25067 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.63□□□□□ -0.23
COL8A2P25067 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.63□□□□□ -0.23
COL8A2P25067 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC13.63□□□□□ -0.23
COL8A2P25067 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC13.63□□□□□ -0.23
COL8A2P25067 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
COL8A2P25067 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 ABR-203ENST00000536794 2213 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.62□□□□□ -0.23
COL8A2P25067 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.62□□□□□ -0.23
COL8A2P25067 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.62□□□□□ -0.23
COL8A2P25067 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC13.62□□□□□ -0.23
COL8A2P25067 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.62□□□□□ -0.23
COL8A2P25067 AC008738.7-201ENST00000609744 511 ntBASIC13.62□□□□□ -0.23
COL8A2P25067 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.62□□□□□ -0.23
COL8A2P25067 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
COL8A2P25067 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.62□□□□□ -0.23
COL8A2P25067 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.61□□□□□ -0.23
COL8A2P25067 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
COL8A2P25067 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
COL8A2P25067 KRT8P12-202ENST00000472924 1397 ntBASIC13.61□□□□□ -0.23
COL8A2P25067 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.61□□□□□ -0.23
COL8A2P25067 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.61□□□□□ -0.23
COL8A2P25067 AL592424.1-201ENST00000563624 1536 ntBASIC13.61□□□□□ -0.23
COL8A2P25067 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.61□□□□□ -0.23
COL8A2P25067 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
COL8A2P25067 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.61□□□□□ -0.23
COL8A2P25067 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms