Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 MIR3687-2-201ENST00000577708 61 ntBASIC18.65■□□□□ 0.58
ATP2B1P20020 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 AC026120.1-201ENST00000611536 926 ntBASIC18.65■□□□□ 0.58
ATP2B1P20020 MIR3687-1-201ENST00000614492 61 ntBASIC18.65■□□□□ 0.58
ATP2B1P20020 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 AKAP8P1-201ENST00000434743 1349 ntBASIC18.65■□□□□ 0.58
ATP2B1P20020 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B1P20020 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B1P20020 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.65■□□□□ 0.58
ATP2B1P20020 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ATP2B1P20020 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ATP2B1P20020 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B1P20020 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC18.65■□□□□ 0.58
ATP2B1P20020 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ATP2B1P20020 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2B1P20020 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.64■□□□□ 0.58
ATP2B1P20020 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ATP2B1P20020 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
ATP2B1P20020 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.64■□□□□ 0.57
ATP2B1P20020 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2B1P20020 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 MYB-201ENST00000316528 3571 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 MYB-241ENST00000616088 3573 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
ATP2B1P20020 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 UPF3AP3-201ENST00000420996 769 ntBASIC18.64■□□□□ 0.57
ATP2B1P20020 ADH5P3-201ENST00000433842 1137 ntBASIC18.64■□□□□ 0.57
ATP2B1P20020 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2B1P20020 AC079140.1-201ENST00000508039 487 ntBASIC18.64■□□□□ 0.57
ATP2B1P20020 MIR4469-201ENST00000583919 79 ntBASIC18.64■□□□□ 0.57
ATP2B1P20020 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 AC007950.2-201ENST00000615045 2347 ntBASIC18.64■□□□□ 0.57
ATP2B1P20020 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.64■□□□□ 0.57
ATP2B1P20020 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.64■□□□□ 0.57
ATP2B1P20020 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP2B1P20020 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 AL589702.1-201ENST00000641229 1509 ntBASIC18.64■□□□□ 0.57
ATP2B1P20020 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ATP2B1P20020 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ATP2B1P20020 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ATP2B1P20020 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 RPSAP43-201ENST00000402237 625 ntBASIC18.63■□□□□ 0.57
ATP2B1P20020 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.63■□□□□ 0.57
ATP2B1P20020 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 GPX1P2-201ENST00000429271 606 ntBASIC18.63■□□□□ 0.57
ATP2B1P20020 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP2B1P20020 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.63■□□□□ 0.57
ATP2B1P20020 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.63■□□□□ 0.57
ATP2B1P20020 FAM86C2P-203ENST00000528684 1004 ntBASIC18.63■□□□□ 0.57
ATP2B1P20020 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
ATP2B1P20020 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC18.63■□□□□ 0.57
ATP2B1P20020 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ATP2B1P20020 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms