Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.14■□□□□ 0.17
XRCC1P18887 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.14■□□□□ 0.17
XRCC1P18887 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
XRCC1P18887 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
XRCC1P18887 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
XRCC1P18887 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 GPS2P2-201ENST00000430745 888 ntBASIC16.13■□□□□ 0.17
XRCC1P18887 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 HLA-J-202ENST00000469281 1241 ntBASIC16.13■□□□□ 0.17
XRCC1P18887 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 AL138918.1-201ENST00000568306 659 ntBASIC16.13■□□□□ 0.17
XRCC1P18887 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 AP001059.3-201ENST00000619053 235 ntBASIC16.13■□□□□ 0.17
XRCC1P18887 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.13■□□□□ 0.17
XRCC1P18887 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.13■□□□□ 0.17
XRCC1P18887 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
XRCC1P18887 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
XRCC1P18887 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
XRCC1P18887 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
XRCC1P18887 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.12■□□□□ 0.17
XRCC1P18887 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
XRCC1P18887 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC1P18887 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.12■□□□□ 0.17
XRCC1P18887 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.12■□□□□ 0.17
XRCC1P18887 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC1P18887 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC1P18887 AC073347.1-201ENST00000421633 2643 ntBASIC16.12■□□□□ 0.17
XRCC1P18887 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.12■□□□□ 0.17
XRCC1P18887 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
XRCC1P18887 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
XRCC1P18887 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 RBPMS2P1-201ENST00000437762 623 ntBASIC16.12■□□□□ 0.17
XRCC1P18887 CYMP-203ENST00000474680 1263 ntBASIC16.12■□□□□ 0.17
XRCC1P18887 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC1P18887 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.12■□□□□ 0.17
XRCC1P18887 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.12■□□□□ 0.17
XRCC1P18887 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.12■□□□□ 0.17
XRCC1P18887 AC015911.4-201ENST00000588022 1070 ntBASIC16.12■□□□□ 0.17
XRCC1P18887 AC073389.1-201ENST00000595595 795 ntBASIC16.12■□□□□ 0.17
XRCC1P18887 AL355385.1-201ENST00000606123 409 ntBASIC16.12■□□□□ 0.17
XRCC1P18887 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.12■□□□□ 0.17
XRCC1P18887 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.12■□□□□ 0.17
XRCC1P18887 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
XRCC1P18887 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
XRCC1P18887 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms