Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 AC023908.3-201ENST00000564211 3047 ntBASIC14.22□□□□□ -0.13
ATF1P18846 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.22□□□□□ -0.13
ATF1P18846 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
ATF1P18846 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
ATF1P18846 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 FAM197Y8-203ENST00000450145 560 ntBASIC14.21□□□□□ -0.13
ATF1P18846 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 UNC93B7-201ENST00000509439 705 ntBASIC14.21□□□□□ -0.13
ATF1P18846 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC14.21□□□□□ -0.13
ATF1P18846 TP73-AS1-207ENST00000624167 988 ntBASIC14.21□□□□□ -0.13
ATF1P18846 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
ATF1P18846 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.21□□□□□ -0.13
ATF1P18846 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
ATF1P18846 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
ATF1P18846 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
ATF1P18846 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
ATF1P18846 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.21□□□□□ -0.14
ATF1P18846 AC087481.3-201ENST00000602886 1894 ntBASIC14.21□□□□□ -0.14
ATF1P18846 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
ATF1P18846 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
ATF1P18846 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.2□□□□□ -0.14
ATF1P18846 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.2□□□□□ -0.14
ATF1P18846 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 AP002414.3-201ENST00000589352 1468 ntBASIC14.2□□□□□ -0.14
ATF1P18846 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 RPS2P28-201ENST00000314255 741 ntBASIC14.2□□□□□ -0.14
ATF1P18846 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ATF1P18846 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 HNRNPDP1-201ENST00000439535 754 ntBASIC14.2□□□□□ -0.14
ATF1P18846 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.2□□□□□ -0.14
ATF1P18846 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.2□□□□□ -0.14
ATF1P18846 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.2□□□□□ -0.14
ATF1P18846 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.2□□□□□ -0.14
ATF1P18846 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 AC004790.2-201ENST00000623588 572 ntBASIC14.2□□□□□ -0.14
ATF1P18846 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
ATF1P18846 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.2□□□□□ -0.14
ATF1P18846 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.2□□□□□ -0.14
ATF1P18846 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
ATF1P18846 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
ATF1P18846 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.19□□□□□ -0.14
ATF1P18846 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms