Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP1P11387 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TOP1P11387 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP1P11387 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TOP1P11387 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 TSSK5P-201ENST00000423978 907 ntBASIC18.94■□□□□ 0.62
TOP1P11387 FAM8A3P-201ENST00000427218 844 ntBASIC18.94■□□□□ 0.62
TOP1P11387 WDR53-203ENST00000429115 683 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.94■□□□□ 0.62
TOP1P11387 NAA60-208ENST00000570819 833 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.94■□□□□ 0.62
TOP1P11387 TEX28P1-201ENST00000613479 1221 ntBASIC18.94■□□□□ 0.62
TOP1P11387 TEX28P2-201ENST00000617764 1221 ntBASIC18.94■□□□□ 0.62
TOP1P11387 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TOP1P11387 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TOP1P11387 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
TOP1P11387 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.93■□□□□ 0.62
TOP1P11387 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.93■□□□□ 0.62
TOP1P11387 AL080243.2-201ENST00000418783 582 ntBASIC18.93■□□□□ 0.62
TOP1P11387 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 AC245100.5-201ENST00000452108 331 ntBASIC18.93■□□□□ 0.62
TOP1P11387 AL512638.1-201ENST00000457493 794 ntBASIC18.93■□□□□ 0.62
TOP1P11387 AC004890.2-204ENST00000481968 304 ntBASIC18.93■□□□□ 0.62
TOP1P11387 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC18.93■□□□□ 0.62
TOP1P11387 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
TOP1P11387 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.93■□□□□ 0.62
TOP1P11387 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TOP1P11387 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TOP1P11387 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC18.92■□□□□ 0.62
TOP1P11387 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.92■□□□□ 0.62
TOP1P11387 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.92■□□□□ 0.62
TOP1P11387 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TOP1P11387 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms