Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBCP0CG48 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
UBCP0CG48 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
UBCP0CG48 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBCP0CG48 AC016027.1-202ENST00000607927 1699 ntBASIC14.22□□□□□ -0.13
UBCP0CG48 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.22□□□□□ -0.13
UBCP0CG48 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBCP0CG48 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
UBCP0CG48 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBCP0CG48 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBCP0CG48 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
UBCP0CG48 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.22□□□□□ -0.13
UBCP0CG48 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.22□□□□□ -0.13
UBCP0CG48 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
UBCP0CG48 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.21□□□□□ -0.13
UBCP0CG48 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.21□□□□□ -0.13
UBCP0CG48 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.21□□□□□ -0.13
UBCP0CG48 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
UBCP0CG48 HNRNPDP1-201ENST00000439535 754 ntBASIC14.21□□□□□ -0.13
UBCP0CG48 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC14.21□□□□□ -0.13
UBCP0CG48 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 AC093724.1-201ENST00000448659 1027 ntBASIC14.21□□□□□ -0.13
UBCP0CG48 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 AC108751.1-201ENST00000490852 363 ntBASIC14.21□□□□□ -0.13
UBCP0CG48 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.21□□□□□ -0.13
UBCP0CG48 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 TNRC18P2-201ENST00000417666 2714 ntBASIC14.21□□□□□ -0.13
UBCP0CG48 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.21□□□□□ -0.13
UBCP0CG48 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
UBCP0CG48 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
UBCP0CG48 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBCP0CG48 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBCP0CG48 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
UBCP0CG48 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
UBCP0CG48 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
UBCP0CG48 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
UBCP0CG48 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBCP0CG48 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.21□□□□□ -0.14
UBCP0CG48 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBCP0CG48 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.14
UBCP0CG48 AL009178.2-201ENST00000597278 2719 ntBASIC14.21□□□□□ -0.14
UBCP0CG48 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
UBCP0CG48 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.2□□□□□ -0.14
UBCP0CG48 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.2□□□□□ -0.14
UBCP0CG48 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.2□□□□□ -0.14
UBCP0CG48 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.2□□□□□ -0.14
UBCP0CG48 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 KRT18P34-201ENST00000488218 1270 ntBASIC14.2□□□□□ -0.14
UBCP0CG48 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 AC109635.5-201ENST00000533593 962 ntBASIC14.2□□□□□ -0.14
UBCP0CG48 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.2□□□□□ -0.14
UBCP0CG48 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.2□□□□□ -0.14
UBCP0CG48 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.2□□□□□ -0.14
UBCP0CG48 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.2□□□□□ -0.14
UBCP0CG48 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.2□□□□□ -0.14
UBCP0CG48 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
UBCP0CG48 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.2□□□□□ -0.14
UBCP0CG48 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
UBCP0CG48 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.19□□□□□ -0.14
UBCP0CG48 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.19□□□□□ -0.14
UBCP0CG48 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms