Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC116165.1-201ENST00000611806 668 ntBASIC16.25■□□□□ 0.19
RETP07949 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 KRT8P49-201ENST00000604166 1432 ntBASIC16.25■□□□□ 0.19
RETP07949 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.25■□□□□ 0.19
RETP07949 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.25■□□□□ 0.19
RETP07949 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 AC020907.1-201ENST00000616460 1350 ntBASIC16.25■□□□□ 0.19
RETP07949 AL021920.2-201ENST00000624828 1351 ntBASIC16.25■□□□□ 0.19
RETP07949 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RETP07949 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
RETP07949 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
RETP07949 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.24■□□□□ 0.19
RETP07949 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.24■□□□□ 0.19
RETP07949 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
RETP07949 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.24■□□□□ 0.19
RETP07949 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
RETP07949 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.24■□□□□ 0.19
RETP07949 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.24■□□□□ 0.19
RETP07949 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RETP07949 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.24■□□□□ 0.19
RETP07949 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.24■□□□□ 0.19
RETP07949 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.24■□□□□ 0.19
RETP07949 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.24■□□□□ 0.19
RETP07949 WFDC1-204ENST00000613603 549 ntBASIC16.24■□□□□ 0.19
RETP07949 AC004461.2-201ENST00000629517 803 ntBASIC16.24■□□□□ 0.19
RETP07949 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.24■□□□□ 0.19
RETP07949 AL033527.5-201ENST00000641382 801 ntBASIC16.24■□□□□ 0.19
RETP07949 AL033527.5-202ENST00000641632 1098 ntBASIC16.24■□□□□ 0.19
RETP07949 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.24■□□□□ 0.19
RETP07949 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.24■□□□□ 0.19
RETP07949 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RETP07949 EGFEM1P-202ENST00000431685 1563 ntBASIC16.24■□□□□ 0.19
RETP07949 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.24■□□□□ 0.19
RETP07949 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.24■□□□□ 0.19
RETP07949 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RETP07949 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.24■□□□□ 0.19
RETP07949 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RETP07949 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RETP07949 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 AL162727.3-201ENST00000635661 2787 ntBASIC16.23■□□□□ 0.19
RETP07949 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
RETP07949 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.23■□□□□ 0.19
RETP07949 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 ANKRD19P-201ENST00000338192 862 ntBASIC16.23■□□□□ 0.19
RETP07949 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RETP07949 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RETP07949 MIR1908-201ENST00000410394 80 ntBASIC16.23■□□□□ 0.19
RETP07949 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RETP07949 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.23■□□□□ 0.19
RETP07949 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC16.23■□□□□ 0.19
RETP07949 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.23■□□□□ 0.19
RETP07949 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.23■□□□□ 0.19
RETP07949 AL583810.1-201ENST00000553344 1045 ntBASIC16.23■□□□□ 0.19
RETP07949 RRP7BP-205ENST00000566851 833 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms