Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
TPM3P06753 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TPM3P06753 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC18.17■□□□□ 0.5
TPM3P06753 IER3-202ENST00000376377 1350 ntBASIC18.17■□□□□ 0.5
TPM3P06753 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.17■□□□□ 0.5
TPM3P06753 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 AC106881.1-201ENST00000605849 3329 ntBASIC18.16■□□□□ 0.5
TPM3P06753 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 POR-201ENST00000394893 2532 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM3P06753 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
TPM3P06753 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TPM3P06753 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
TPM3P06753 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 HCG4-201ENST00000418983 998 ntBASIC18.16■□□□□ 0.5
TPM3P06753 PCED1CP-201ENST00000419887 785 ntBASIC18.16■□□□□ 0.5
TPM3P06753 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC18.16■□□□□ 0.5
TPM3P06753 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM3P06753 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM3P06753 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 AC005412.3-201ENST00000580309 715 ntBASIC18.16■□□□□ 0.5
TPM3P06753 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.16■□□□□ 0.5
TPM3P06753 NKAPP1-205ENST00000585790 367 ntBASIC18.16■□□□□ 0.5
TPM3P06753 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.16■□□□□ 0.5
TPM3P06753 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM3P06753 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TPM3P06753 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.16■□□□□ 0.5
TPM3P06753 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.16■□□□□ 0.5
TPM3P06753 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.16■□□□□ 0.5
TPM3P06753 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 SLC22A20-204ENST00000530038 1673 ntBASIC18.15■□□□□ 0.5
TPM3P06753 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM3P06753 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.15■□□□□ 0.5
TPM3P06753 PMS2P1-201ENST00000431037 1228 ntBASIC18.15■□□□□ 0.5
TPM3P06753 AC132008.2-207ENST00000454517 770 ntBASIC18.15■□□□□ 0.5
TPM3P06753 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.15■□□□□ 0.5
TPM3P06753 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.15■□□□□ 0.5
TPM3P06753 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM3P06753 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
TPM3P06753 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
TPM3P06753 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC18.15■□□□□ 0.5
TPM3P06753 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TPM3P06753 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms