Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.29■□□□□ 0.04
MT-ND1P03886 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND1P03886 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND1P03886 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
MT-ND1P03886 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC15.29■□□□□ 0.04
MT-ND1P03886 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 PTCHD3P3-201ENST00000403073 906 ntBASIC15.29■□□□□ 0.04
MT-ND1P03886 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND1P03886 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.29■□□□□ 0.04
MT-ND1P03886 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.29■□□□□ 0.04
MT-ND1P03886 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 IRF8-202ENST00000562492 946 ntTSL 3 BASIC15.29■□□□□ 0.04
MT-ND1P03886 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND1P03886 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.29■□□□□ 0.04
MT-ND1P03886 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MT-ND1P03886 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.29■□□□□ 0.04
MT-ND1P03886 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
MT-ND1P03886 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.29■□□□□ 0.04
MT-ND1P03886 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 AL365209.1-201ENST00000624418 6473 ntBASIC15.28■□□□□ 0.04
MT-ND1P03886 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MT-ND1P03886 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.28■□□□□ 0.04
MT-ND1P03886 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.28■□□□□ 0.04
MT-ND1P03886 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 SAPCD2P3-201ENST00000455031 850 ntBASIC15.28■□□□□ 0.04
MT-ND1P03886 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC15.28■□□□□ 0.04
MT-ND1P03886 AC107918.2-201ENST00000530817 355 ntBASIC15.28■□□□□ 0.04
MT-ND1P03886 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.28■□□□□ 0.04
MT-ND1P03886 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC15.28■□□□□ 0.04
MT-ND1P03886 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC15.28■□□□□ 0.04
MT-ND1P03886 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC15.28■□□□□ 0.04
MT-ND1P03886 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
MT-ND1P03886 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MT-ND1P03886 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.28■□□□□ 0.04
MT-ND1P03886 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
MT-ND1P03886 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.28■□□□□ 0.04
MT-ND1P03886 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
MT-ND1P03886 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MT-ND1P03886 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MT-ND1P03886 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MT-ND1P03886 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MT-ND1P03886 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MT-ND1P03886 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.27■□□□□ 0.04
MT-ND1P03886 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
MT-ND1P03886 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.27■□□□□ 0.04
MT-ND1P03886 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms