Protein–RNA interactions for Protein: O95977

S1PR4, Sphingosine 1-phosphate receptor 4, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR4O95977 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
S1PR4O95977 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
S1PR4O95977 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.02■□□□□ 0.16
S1PR4O95977 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.02■□□□□ 0.16
S1PR4O95977 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.02■□□□□ 0.16
S1PR4O95977 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC16.02■□□□□ 0.16
S1PR4O95977 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.02■□□□□ 0.16
S1PR4O95977 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.02■□□□□ 0.16
S1PR4O95977 GPALPP1-207ENST00000611650 899 ntBASIC16.02■□□□□ 0.16
S1PR4O95977 AC055717.3-201ENST00000622967 595 ntBASIC16.02■□□□□ 0.16
S1PR4O95977 AC134684.3-201ENST00000641758 218 ntBASIC16.02■□□□□ 0.16
S1PR4O95977 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
S1PR4O95977 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
S1PR4O95977 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
S1PR4O95977 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
S1PR4O95977 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
S1PR4O95977 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.02■□□□□ 0.15
S1PR4O95977 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.02■□□□□ 0.15
S1PR4O95977 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.02■□□□□ 0.15
S1PR4O95977 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.02■□□□□ 0.15
S1PR4O95977 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.02■□□□□ 0.15
S1PR4O95977 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
S1PR4O95977 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
S1PR4O95977 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
S1PR4O95977 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.01■□□□□ 0.15
S1PR4O95977 AC069335.1-201ENST00000489972 472 ntBASIC16.01■□□□□ 0.15
S1PR4O95977 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.01■□□□□ 0.15
S1PR4O95977 RNA5SP410-201ENST00000516285 106 ntBASIC16.01■□□□□ 0.15
S1PR4O95977 IGHV3-62-201ENST00000520057 340 ntBASIC16.01■□□□□ 0.15
S1PR4O95977 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.01■□□□□ 0.15
S1PR4O95977 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
S1PR4O95977 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
S1PR4O95977 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
S1PR4O95977 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16■□□□□ 0.15
S1PR4O95977 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16■□□□□ 0.15
S1PR4O95977 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
S1PR4O95977 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
S1PR4O95977 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16■□□□□ 0.15
S1PR4O95977 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16■□□□□ 0.15
S1PR4O95977 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
S1PR4O95977 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
S1PR4O95977 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms