Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CNOT4O95628 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.39□□□□□ -0.11
CNOT4O95628 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CNOT4O95628 AC015922.1-201ENST00000421102 1152 ntBASIC14.39□□□□□ -0.11
CNOT4O95628 BASP1P1-201ENST00000430708 665 ntBASIC14.39□□□□□ -0.11
CNOT4O95628 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.39□□□□□ -0.11
CNOT4O95628 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.39□□□□□ -0.11
CNOT4O95628 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.39□□□□□ -0.11
CNOT4O95628 AC140878.1-201ENST00000565277 250 ntBASIC14.39□□□□□ -0.11
CNOT4O95628 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.39□□□□□ -0.11
CNOT4O95628 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 MIR6080-201ENST00000617359 66 ntBASIC14.39□□□□□ -0.11
CNOT4O95628 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.39□□□□□ -0.11
CNOT4O95628 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 PCDHA14-201ENST00000506751 2298 ntBASIC14.39□□□□□ -0.11
CNOT4O95628 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 AC063926.2-201ENST00000623766 1308 ntBASIC14.39□□□□□ -0.11
CNOT4O95628 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CNOT4O95628 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.39□□□□□ -0.11
CNOT4O95628 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 AC005622.1-201ENST00000636801 1703 ntBASIC14.38□□□□□ -0.11
CNOT4O95628 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CNOT4O95628 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.38□□□□□ -0.11
CNOT4O95628 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 AC107890.1-201ENST00000422478 521 ntBASIC14.38□□□□□ -0.11
CNOT4O95628 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 RNA5SP410-201ENST00000516285 106 ntBASIC14.38□□□□□ -0.11
CNOT4O95628 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC14.38□□□□□ -0.11
CNOT4O95628 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.38□□□□□ -0.11
CNOT4O95628 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.38□□□□□ -0.11
CNOT4O95628 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 AC026979.3-201ENST00000607315 403 ntBASIC14.38□□□□□ -0.11
CNOT4O95628 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CNOT4O95628 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.38□□□□□ -0.11
CNOT4O95628 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 AC008677.1-201ENST00000519230 1561 ntBASIC14.38□□□□□ -0.11
CNOT4O95628 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 PCDHB19P-201ENST00000570871 2371 ntBASIC14.38□□□□□ -0.11
CNOT4O95628 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CNOT4O95628 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.38□□□□□ -0.11
CNOT4O95628 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.38□□□□□ -0.11
CNOT4O95628 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CNOT4O95628 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms