Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH8O95206 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDH8O95206 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PCDH8O95206 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
PCDH8O95206 AC005034.1-201ENST00000426657 489 ntBASIC16.09■□□□□ 0.17
PCDH8O95206 GNAQP1-201ENST00000444815 1067 ntBASIC16.09■□□□□ 0.17
PCDH8O95206 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH8O95206 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 SDHAP3-202ENST00000515467 728 ntBASIC16.09■□□□□ 0.17
PCDH8O95206 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH8O95206 ZNF890P-202ENST00000530367 1156 ntBASIC16.09■□□□□ 0.17
PCDH8O95206 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH8O95206 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH8O95206 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH8O95206 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH8O95206 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDH8O95206 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.09■□□□□ 0.17
PCDH8O95206 AL132655.2-201ENST00000596276 594 ntBASIC16.09■□□□□ 0.17
PCDH8O95206 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.09■□□□□ 0.17
PCDH8O95206 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PCDH8O95206 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PCDH8O95206 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.09■□□□□ 0.17
PCDH8O95206 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
PCDH8O95206 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDH8O95206 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH8O95206 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH8O95206 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PCDH8O95206 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH8O95206 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
PCDH8O95206 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDH8O95206 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.08■□□□□ 0.17
PCDH8O95206 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
PCDH8O95206 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDH8O95206 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH8O95206 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH8O95206 RBM7-207ENST00000544582 692 ntTSL 3 BASIC16.08■□□□□ 0.16
PCDH8O95206 AL109936.8-201ENST00000641772 604 ntBASIC16.08■□□□□ 0.16
PCDH8O95206 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
PCDH8O95206 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.08■□□□□ 0.16
PCDH8O95206 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH8O95206 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PCDH8O95206 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.08■□□□□ 0.16
PCDH8O95206 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
PCDH8O95206 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PCDH8O95206 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
PCDH8O95206 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH8O95206 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH8O95206 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH8O95206 PCDHA12-202ENST00000613593 2588 ntBASIC16.07■□□□□ 0.16
PCDH8O95206 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 SPDYE19P-201ENST00000338590 713 ntBASIC16.07■□□□□ 0.16
PCDH8O95206 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH8O95206 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PCDH8O95206 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.07■□□□□ 0.16
PCDH8O95206 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PCDH8O95206 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH8O95206 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.07■□□□□ 0.16
PCDH8O95206 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.07■□□□□ 0.16
PCDH8O95206 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.07■□□□□ 0.16
PCDH8O95206 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms