Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.55■□□□□ 0.08
CPNE3O75131 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CPNE3O75131 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.55■□□□□ 0.08
CPNE3O75131 UGT1A2P-201ENST00000454886 866 ntBASIC15.55■□□□□ 0.08
CPNE3O75131 SATB1-217ENST00000493952 626 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE3O75131 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.55■□□□□ 0.08
CPNE3O75131 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE3O75131 RN7SL204P-201ENST00000582831 262 ntBASIC15.55■□□□□ 0.08
CPNE3O75131 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.55■□□□□ 0.08
CPNE3O75131 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CPNE3O75131 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CPNE3O75131 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 AL512652.2-201ENST00000625156 1716 ntBASIC15.54■□□□□ 0.08
CPNE3O75131 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.54■□□□□ 0.08
CPNE3O75131 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.54■□□□□ 0.08
CPNE3O75131 AC004890.2-204ENST00000481968 304 ntBASIC15.54■□□□□ 0.08
CPNE3O75131 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE3O75131 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.54■□□□□ 0.08
CPNE3O75131 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE3O75131 AL138828.2-201ENST00000615812 383 ntBASIC15.54■□□□□ 0.08
CPNE3O75131 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE3O75131 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE3O75131 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.54■□□□□ 0.08
CPNE3O75131 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CPNE3O75131 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.54■□□□□ 0.08
CPNE3O75131 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.54■□□□□ 0.08
CPNE3O75131 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 CETN4P-206ENST00000642099 2168 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CPNE3O75131 AGGF1P2-201ENST00000426656 2106 ntBASIC15.53■□□□□ 0.08
CPNE3O75131 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms