Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RPL13AP25-201ENST00000484130 612 ntBASIC19.96■□□□□ 0.79
CACNA1FO60840 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC19.96■□□□□ 0.79
CACNA1FO60840 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CACNA1FO60840 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC19.96■□□□□ 0.79
CACNA1FO60840 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC19.96■□□□□ 0.79
CACNA1FO60840 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1FO60840 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1FO60840 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CACNA1FO60840 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA1FO60840 ELK1P1-201ENST00000485699 580 ntBASIC19.95■□□□□ 0.78
CACNA1FO60840 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.95■□□□□ 0.78
CACNA1FO60840 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC19.95■□□□□ 0.78
CACNA1FO60840 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.95■□□□□ 0.78
CACNA1FO60840 AC132938.2-201ENST00000579188 680 ntBASIC19.95■□□□□ 0.78
CACNA1FO60840 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC19.95■□□□□ 0.78
CACNA1FO60840 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.95■□□□□ 0.78
CACNA1FO60840 AL591163.1-201ENST00000641757 987 ntBASIC19.95■□□□□ 0.78
CACNA1FO60840 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC19.95■□□□□ 0.78
CACNA1FO60840 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA1FO60840 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CACNA1FO60840 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.95■□□□□ 0.78
CACNA1FO60840 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.95■□□□□ 0.78
CACNA1FO60840 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.78
CACNA1FO60840 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
CACNA1FO60840 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 AC120045.2-201ENST00000567334 178 ntBASIC19.95■□□□□ 0.78
CACNA1FO60840 AC008735.3-201ENST00000596646 500 ntBASIC19.95■□□□□ 0.78
CACNA1FO60840 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
CACNA1FO60840 AL358472.5-202ENST00000641448 1267 ntBASIC19.95■□□□□ 0.78
CACNA1FO60840 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CACNA1FO60840 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CACNA1FO60840 DRD5P1-201ENST00000456605 1438 ntBASIC19.95■□□□□ 0.78
CACNA1FO60840 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 RPL5P21-201ENST00000404620 815 ntBASIC19.94■□□□□ 0.78
CACNA1FO60840 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA1FO60840 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1FO60840 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA1FO60840 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA1FO60840 AL596325.1-201ENST00000563991 1082 ntBASIC19.94■□□□□ 0.78
CACNA1FO60840 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1FO60840 GPR39-203ENST00000622084 900 ntTSL 5 BASIC19.94■□□□□ 0.78
CACNA1FO60840 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
CACNA1FO60840 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 HNRNPA1P48-201ENST00000562726 1377 ntBASIC19.94■□□□□ 0.78
CACNA1FO60840 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 NSL1-201ENST00000366976 722 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 NME2-201ENST00000393183 568 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CACNA1FO60840 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.94■□□□□ 0.78
CACNA1FO60840 WFDC1-204ENST00000613603 549 ntBASIC19.94■□□□□ 0.78
CACNA1FO60840 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC19.94■□□□□ 0.78
CACNA1FO60840 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.93■□□□□ 0.78
CACNA1FO60840 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1FO60840 AC084364.1-201ENST00000551967 1556 ntBASIC19.93■□□□□ 0.78
CACNA1FO60840 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1FO60840 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CACNA1FO60840 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CACNA1FO60840 FAM86LP-201ENST00000478302 853 ntBASIC19.93■□□□□ 0.78
CACNA1FO60840 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.93■□□□□ 0.78
CACNA1FO60840 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC19.93■□□□□ 0.78
CACNA1FO60840 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.93■□□□□ 0.78
CACNA1FO60840 RBM7-207ENST00000544582 692 ntTSL 3 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms