Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
XRCC2O43543 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
XRCC2O43543 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
XRCC2O43543 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
XRCC2O43543 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
XRCC2O43543 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.08□□□□□ -0.16
XRCC2O43543 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
XRCC2O43543 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
XRCC2O43543 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.08□□□□□ -0.16
XRCC2O43543 AL355306.1-201ENST00000415580 579 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.08□□□□□ -0.16
XRCC2O43543 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.08□□□□□ -0.16
XRCC2O43543 FAM58CP-201ENST00000435741 640 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 AC105233.2-201ENST00000523697 349 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 AF228730.5-201ENST00000530288 346 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.08□□□□□ -0.16
XRCC2O43543 MIR4321-201ENST00000592276 80 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 AC073389.1-201ENST00000595595 795 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.08□□□□□ -0.16
XRCC2O43543 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.08□□□□□ -0.16
XRCC2O43543 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
XRCC2O43543 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
XRCC2O43543 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
XRCC2O43543 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
XRCC2O43543 AC067930.6-201ENST00000623257 4947 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 AC092850.2-201ENST00000623821 2697 ntBASIC14.08□□□□□ -0.16
XRCC2O43543 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC14.07□□□□□ -0.16
XRCC2O43543 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 AL022342.1-201ENST00000400363 863 ntBASIC14.07□□□□□ -0.16
XRCC2O43543 AC023274.1-201ENST00000418278 595 ntBASIC14.07□□□□□ -0.16
XRCC2O43543 AL671277.1-201ENST00000429656 993 ntBASIC14.07□□□□□ -0.16
XRCC2O43543 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.07□□□□□ -0.16
XRCC2O43543 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.07□□□□□ -0.16
XRCC2O43543 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 AL135744.1-201ENST00000565098 629 ntBASIC14.07□□□□□ -0.16
XRCC2O43543 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
XRCC2O43543 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.07□□□□□ -0.16
XRCC2O43543 AC023824.1-201ENST00000562945 2975 ntBASIC14.07□□□□□ -0.16
XRCC2O43543 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
XRCC2O43543 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.06□□□□□ -0.16
XRCC2O43543 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
XRCC2O43543 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
XRCC2O43543 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms