Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
FOXN1O15353 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.2■□□□□ 0.66
FOXN1O15353 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 AC091271.1-201ENST00000611877 1162 ntBASIC19.2■□□□□ 0.66
FOXN1O15353 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC19.2■□□□□ 0.66
FOXN1O15353 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
FOXN1O15353 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC19.2■□□□□ 0.66
FOXN1O15353 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.2■□□□□ 0.66
FOXN1O15353 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.2■□□□□ 0.66
FOXN1O15353 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
FOXN1O15353 CDC14C-201ENST00000428251 1719 ntBASIC19.2■□□□□ 0.66
FOXN1O15353 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXN1O15353 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
FOXN1O15353 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXN1O15353 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.19■□□□□ 0.66
FOXN1O15353 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXN1O15353 RPL13AP20-201ENST00000459725 609 ntBASIC19.19■□□□□ 0.66
FOXN1O15353 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 RIT1-205ENST00000539040 919 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXN1O15353 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXN1O15353 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXN1O15353 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.19■□□□□ 0.66
FOXN1O15353 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXN1O15353 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC19.19■□□□□ 0.66
FOXN1O15353 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXN1O15353 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.19■□□□□ 0.66
FOXN1O15353 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
FOXN1O15353 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
FOXN1O15353 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
FOXN1O15353 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXN1O15353 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXN1O15353 PAM16-204ENST00000571941 674 ntTSL 3 BASIC19.18■□□□□ 0.66
FOXN1O15353 AC010328.2-201ENST00000597698 1111 ntBASIC19.18■□□□□ 0.66
FOXN1O15353 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.18■□□□□ 0.66
FOXN1O15353 MIR7845-201ENST00000618396 99 ntBASIC19.18■□□□□ 0.66
FOXN1O15353 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
FOXN1O15353 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.18■□□□□ 0.66
FOXN1O15353 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXN1O15353 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
FOXN1O15353 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
FOXN1O15353 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.18■□□□□ 0.66
FOXN1O15353 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXN1O15353 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN1O15353 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN1O15353 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC19.17■□□□□ 0.66
FOXN1O15353 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN1O15353 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN1O15353 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN1O15353 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
FOXN1O15353 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXN1O15353 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC19.17■□□□□ 0.66
FOXN1O15353 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms