Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.33■□□□□ 0.21
AP3B1O00203 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP3B1O00203 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.33■□□□□ 0.21
AP3B1O00203 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP3B1O00203 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP3B1O00203 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP3B1O00203 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
AP3B1O00203 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.33■□□□□ 0.21
AP3B1O00203 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
AP3B1O00203 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
AP3B1O00203 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
AP3B1O00203 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
AP3B1O00203 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3B1O00203 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3B1O00203 AL135744.1-201ENST00000565098 629 ntBASIC16.33■□□□□ 0.2
AP3B1O00203 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.33■□□□□ 0.2
AP3B1O00203 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.33■□□□□ 0.2
AP3B1O00203 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.33■□□□□ 0.2
AP3B1O00203 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.33■□□□□ 0.2
AP3B1O00203 AC092865.6-201ENST00000642101 219 ntBASIC16.33■□□□□ 0.2
AP3B1O00203 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
AP3B1O00203 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
AP3B1O00203 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
AP3B1O00203 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
AP3B1O00203 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
AP3B1O00203 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3B1O00203 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
AP3B1O00203 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.33■□□□□ 0.2
AP3B1O00203 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.33■□□□□ 0.2
AP3B1O00203 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.32■□□□□ 0.2
AP3B1O00203 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AP3B1O00203 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
AP3B1O00203 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
AP3B1O00203 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
AP3B1O00203 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
AP3B1O00203 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.32■□□□□ 0.2
AP3B1O00203 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.32■□□□□ 0.2
AP3B1O00203 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.32■□□□□ 0.2
AP3B1O00203 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3B1O00203 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
AP3B1O00203 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.32■□□□□ 0.2
AP3B1O00203 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.32■□□□□ 0.2
AP3B1O00203 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3B1O00203 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3B1O00203 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3B1O00203 KRT8P23-201ENST00000560090 1207 ntBASIC16.32■□□□□ 0.2
AP3B1O00203 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.32■□□□□ 0.2
AP3B1O00203 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.32■□□□□ 0.2
AP3B1O00203 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.32■□□□□ 0.2
AP3B1O00203 AC061975.2-201ENST00000581722 295 ntBASIC16.32■□□□□ 0.2
AP3B1O00203 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.32■□□□□ 0.2
AP3B1O00203 AC027307.2-201ENST00000591252 911 ntBASIC16.32■□□□□ 0.2
AP3B1O00203 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3B1O00203 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 AC091812.2-201ENST00000619081 385 ntBASIC16.32■□□□□ 0.2
AP3B1O00203 AC022532.1-201ENST00000624563 1728 ntBASIC16.32■□□□□ 0.2
AP3B1O00203 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.32■□□□□ 0.2
AP3B1O00203 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
AP3B1O00203 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3B1O00203 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.31■□□□□ 0.2
AP3B1O00203 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP3B1O00203 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
AP3B1O00203 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.31■□□□□ 0.2
AP3B1O00203 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 FAM220BP-201ENST00000377689 816 ntBASIC16.31■□□□□ 0.2
AP3B1O00203 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
AP3B1O00203 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.31■□□□□ 0.2
AP3B1O00203 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.31■□□□□ 0.2
AP3B1O00203 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms