Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AC005052.1-201ENST00000625181 2492 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 AC022144.1-201ENST00000602255 1580 ntBASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NPIPA2E9PIF3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AC126755.1-201ENST00000525846 6405 ntBASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 MRPS18AP1-201ENST00000414458 589 ntBASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 TSSK5P-201ENST00000423978 907 ntBASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 SERBP1P5-201ENST00000510079 1181 ntBASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NPIPA2E9PIF3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
NPIPA2E9PIF3 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA2E9PIF3 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.71□□□□□ -0.06
NPIPA2E9PIF3 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.71□□□□□ -0.06
NPIPA2E9PIF3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA2E9PIF3 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.71□□□□□ -0.06
NPIPA2E9PIF3 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
NPIPA2E9PIF3 AC067930.6-201ENST00000623257 4947 ntBASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC14.7□□□□□ -0.06
NPIPA2E9PIF3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms