Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LRIT2A6NDA9 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.32■□□□□ 0.04
LRIT2A6NDA9 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 AC025678.2-201ENST00000562061 970 ntBASIC15.32■□□□□ 0.04
LRIT2A6NDA9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 AL035456.1-201ENST00000456064 1369 ntBASIC15.32■□□□□ 0.04
LRIT2A6NDA9 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 AC007950.2-201ENST00000615045 2347 ntBASIC15.32■□□□□ 0.04
LRIT2A6NDA9 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LRIT2A6NDA9 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 AC068418.2-201ENST00000577309 3703 ntBASIC15.31■□□□□ 0.04
LRIT2A6NDA9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 AC004449.1-201ENST00000564240 433 ntBASIC15.31■□□□□ 0.04
LRIT2A6NDA9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 RN7SL828P-201ENST00000607615 303 ntBASIC15.31■□□□□ 0.04
LRIT2A6NDA9 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LRIT2A6NDA9 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms