Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CCDC66A2RUB6 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 HCG4P8-203ENST00000443049 980 ntBASIC17.58■□□□□ 0.4
CCDC66A2RUB6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 MTDHP3-201ENST00000594186 672 ntBASIC17.58■□□□□ 0.4
CCDC66A2RUB6 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 AL512652.2-201ENST00000625156 1716 ntBASIC17.58■□□□□ 0.4
CCDC66A2RUB6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CCDC66A2RUB6 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 MYO15B-237ENST00000642007 4893 ntBASIC17.57■□□□□ 0.4
CCDC66A2RUB6 KRT8P39-201ENST00000396270 1433 ntBASIC17.57■□□□□ 0.4
CCDC66A2RUB6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AC087163.2-201ENST00000457299 853 ntBASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AC091167.2-201ENST00000579581 588 ntBASIC17.57■□□□□ 0.4
CCDC66A2RUB6 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AL732292.2-201ENST00000609649 430 ntBASIC17.57■□□□□ 0.4
CCDC66A2RUB6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AC004706.3-202ENST00000621574 984 ntBASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AL355877.3-201ENST00000622820 899 ntBASIC17.57■□□□□ 0.4
CCDC66A2RUB6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.57■□□□□ 0.4
CCDC66A2RUB6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCDC66A2RUB6 AC002310.6-201ENST00000624451 1377 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms