Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 AC069148.1-201ENST00000608741 768 ntBASIC14.09□□□□□ -0.15
SHISA3A0PJX4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 AC134407.2-201ENST00000625089 1978 ntBASIC14.09□□□□□ -0.15
SHISA3A0PJX4 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHISA3A0PJX4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHISA3A0PJX4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.08□□□□□ -0.15
SHISA3A0PJX4 AJ011931.1-201ENST00000618749 2492 ntBASIC14.08□□□□□ -0.15
SHISA3A0PJX4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.15
SHISA3A0PJX4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SHISA3A0PJX4 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SHISA3A0PJX4 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHISA3A0PJX4 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SART3-203ENST00000546611 1184 ntBASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.08□□□□□ -0.16
SHISA3A0PJX4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 AC129492.6-201ENST00000611383 1305 ntBASIC14.08□□□□□ -0.16
SHISA3A0PJX4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHISA3A0PJX4 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 AC117489.1-201ENST00000625169 3217 ntBASIC14.07□□□□□ -0.16
SHISA3A0PJX4 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.07□□□□□ -0.16
SHISA3A0PJX4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 AC093724.1-201ENST00000448659 1027 ntBASIC14.07□□□□□ -0.16
SHISA3A0PJX4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
SHISA3A0PJX4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms