Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL121912.1-201ENST00000603683 238 ntBASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 CICP4-201ENST00000447359 2812 ntBASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC104581.4-201ENST00000623126 3052 ntBASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.54□□□□□ -0.24
TRBV6-7A0A0A0MS04 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 POR-201ENST00000394893 2532 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 UNC93B7-201ENST00000509439 705 ntBASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 AC117500.6-201ENST00000624871 588 ntBASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 BANP-203ENST00000393207 2438 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.53□□□□□ -0.24
TRBV6-7A0A0A0MS04 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRBV6-7A0A0A0MS04 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC093724.1-201ENST00000448659 1027 ntBASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 AL513480.1-201ENST00000451731 511 ntBASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-7A0A0A0MS04 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms