Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 AL096865.1-201ENST00000606796 927 ntBASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 AC007950.2-201ENST00000615045 2347 ntBASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 AC008894.3-201ENST00000624324 3103 ntBASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 AC024909.3-201ENST00000611513 2257 ntBASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
COL4A3BPQ9Y5P4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 AL603832.2-201ENST00000566195 2125 ntBASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 AC097493.3-201ENST00000509725 367 ntBASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 IGHV3-42-201ENST00000520410 361 ntBASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
COL4A3BPQ9Y5P4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 MIR648-201ENST00000385046 94 ntBASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 FAM8A3P-201ENST00000427218 844 ntBASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 BASP1P1-201ENST00000430708 665 ntBASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 RNA5SP421-201ENST00000516864 134 ntBASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 MAX-210ENST00000555419 765 ntTSL 5 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 AC024267.1-201ENST00000582320 895 ntBASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 MIR4321-201ENST00000592276 80 ntBASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 AL390754.1-201ENST00000619088 582 ntBASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
COL4A3BPQ9Y5P4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 AC092580.3-201ENST00000430932 139 ntBASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 AC245100.5-201ENST00000452108 331 ntBASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
COL4A3BPQ9Y5P4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms