Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC023157.3-201ENST00000619086 2088 ntBASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AC074386.1-202ENST00000463561 864 ntBASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AC073389.1-201ENST00000595595 795 ntBASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AC068137.2-201ENST00000605408 478 ntBASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 AC105250.1-201ENST00000509378 2057 ntBASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHA3Q9Y5H8 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 AL138918.1-201ENST00000568306 659 ntBASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 AC006486.2-201ENST00000624246 2199 ntBASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PCDHA3Q9Y5H8 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 AC002056.1-201ENST00000395613 760 ntBASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.85■□□□□ 0.29
PCDHA3Q9Y5H8 AC098859.1-201ENST00000502915 1238 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms