Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 RPS8P6-201ENST00000426177 609 ntBASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AC023141.5-201ENST00000458585 616 ntBASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 SPTSSB-204ENST00000617024 1292 ntBASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AC009093.7-201ENST00000623853 1223 ntBASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AL589702.1-201ENST00000641229 1509 ntBASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PPARGC1AQ9UBK2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 KRT18P32-201ENST00000424695 1287 ntBASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 FAM58DP-201ENST00000428076 619 ntBASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.88■□□□□ 0.29
PPARGC1AQ9UBK2 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AL592424.1-201ENST00000563624 1536 ntBASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AC005052.1-201ENST00000625181 2492 ntBASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AC027612.4-201ENST00000605371 583 ntBASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 AL513477.1-201ENST00000602865 2407 ntBASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPARGC1AQ9UBK2 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.86■□□□□ 0.29
PPARGC1AQ9UBK2 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms