Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 AL592424.1-201ENST00000563624 1536 ntBASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
DNMT3BQ9UBC3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AC119751.2-201ENST00000504529 210 ntBASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
DNMT3BQ9UBC3 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 AC092171.3-201ENST00000610122 2651 ntBASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 EEF1DP4-201ENST00000446006 880 ntBASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 RPSAP52-203ENST00000622976 1023 ntBASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
DNMT3BQ9UBC3 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNMT3BQ9UBC3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNMT3BQ9UBC3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.72■□□□□ 0.27
DNMT3BQ9UBC3 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
DNMT3BQ9UBC3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms