Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PDLIM7Q9NR12 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AL691432.1-201ENST00000596308 1422 ntBASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AC099548.2-209ENST00000480264 625 ntBASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AC104596.2-201ENST00000512793 793 ntBASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 RARRES2P5-201ENST00000564013 466 ntBASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 AC092364.2-201ENST00000596710 2692 ntBASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PDLIM7Q9NR12 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.89■□□□□ 0.46
PDLIM7Q9NR12 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PDLIM7Q9NR12 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 MTHFR-217ENST00000641820 1569 ntBASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 BRWD1P1-201ENST00000401091 371 ntBASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
PDLIM7Q9NR12 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.88■□□□□ 0.45
PDLIM7Q9NR12 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms