Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 AC016027.1-202ENST00000607927 1699 ntBASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
POLR2J3Q9H1A7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 AC008677.1-201ENST00000519230 1561 ntBASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 UNC93B6-202ENST00000528242 690 ntBASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 AC096734.2-201ENST00000562054 433 ntBASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 AL161772.1-201ENST00000610494 4412 ntBASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.98□□□□□ -0.01
POLR2J3Q9H1A7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 AC092850.2-201ENST00000623821 2697 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 HAUS4P1-201ENST00000406739 1145 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 AL031284.1-201ENST00000419297 478 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 RHOQP3-201ENST00000437982 621 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 AL009183.1-201ENST00000603760 355 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 AC148477.8-201ENST00000624298 468 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 AC007064.4-201ENST00000637740 555 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 PPT1-215ENST00000641471 2368 ntBASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.97□□□□□ -0.01
POLR2J3Q9H1A7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms