Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PCDH11XQ9BZA7 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 AGER-206ENST00000375070 1463 ntTSL 5 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 BCYRN1-201ENST00000418539 200 ntBASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 AC022137.2-201ENST00000503482 481 ntBASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 AC010328.2-201ENST00000597698 1111 ntBASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 AC009542.2-202ENST00000619004 1067 ntBASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PCDH11XQ9BZA7 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 AC026954.1-201ENST00000429771 1293 ntBASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 PFN1P12-201ENST00000455938 534 ntBASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 AC026410.3-201ENST00000514280 936 ntBASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 AL607033.1-201ENST00000623900 1599 ntBASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PCDH11XQ9BZA7 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 AC005052.1-201ENST00000625181 2492 ntBASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 DUX4L45-201ENST00000566406 1057 ntBASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 CYP2AB1P-202ENST00000454440 1456 ntBASIC20.65■□□□□ 0.9
PCDH11XQ9BZA7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH11XQ9BZA7 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH11XQ9BZA7 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH11XQ9BZA7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PCDH11XQ9BZA7 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.64■□□□□ 0.89
PCDH11XQ9BZA7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms