Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFAF3Q9BU61 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 CD9-202ENST00000382515 1229 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 AC079781.3-201ENST00000449110 356 ntBASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 REXO1L6P-202ENST00000619970 1078 ntBASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
NDUFAF3Q9BU61 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.58□□□□□ -0.39
NDUFAF3Q9BU61 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.58□□□□□ -0.39
NDUFAF3Q9BU61 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
NDUFAF3Q9BU61 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 CICP17-201ENST00000418553 2377 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC091607.1-201ENST00000490318 1060 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 MIR5100-201ENST00000579544 119 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 BNIP3P18-201ENST00000593976 575 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 IGHV3OR16-7-201ENST00000604106 360 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC027601.5-201ENST00000624065 2482 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 OR2I1P-209ENST00000641730 5365 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC027612.1-201ENST00000445234 2395 ntBASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
NDUFAF3Q9BU61 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms