Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC134698.3-201ENST00000523880 214 ntBASIC20.96■□□□□ 0.95
ABCA3Q99758 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC20.96■□□□□ 0.95
ABCA3Q99758 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ABCA3Q99758 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ABCA3Q99758 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC20.96■□□□□ 0.95
ABCA3Q99758 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
ABCA3Q99758 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 MIR769-201ENST00000390225 118 ntBASIC20.95■□□□□ 0.94
ABCA3Q99758 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ABCA3Q99758 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC20.95■□□□□ 0.94
ABCA3Q99758 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC20.95■□□□□ 0.94
ABCA3Q99758 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 CDK7-214ENST00000626796 358 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
ABCA3Q99758 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.95■□□□□ 0.94
ABCA3Q99758 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ABCA3Q99758 SMS-201ENST00000379404 1174 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.95■□□□□ 0.94
ABCA3Q99758 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ABCA3Q99758 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC20.95■□□□□ 0.94
ABCA3Q99758 RN7SL713P-201ENST00000582127 302 ntBASIC20.95■□□□□ 0.94
ABCA3Q99758 AL133499.1-201ENST00000596207 608 ntBASIC20.95■□□□□ 0.94
ABCA3Q99758 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ABCA3Q99758 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ABCA3Q99758 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ABCA3Q99758 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ABCA3Q99758 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC20.94■□□□□ 0.94
ABCA3Q99758 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
ABCA3Q99758 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
ABCA3Q99758 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC20.94■□□□□ 0.94
ABCA3Q99758 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 PARVG-202ENST00000415224 999 ntTSL 2 BASIC20.94■□□□□ 0.94
ABCA3Q99758 POM121L8P-201ENST00000417732 1281 ntBASIC20.94■□□□□ 0.94
ABCA3Q99758 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC20.94■□□□□ 0.94
ABCA3Q99758 POM121L9P-203ENST00000441984 1285 ntBASIC20.94■□□□□ 0.94
ABCA3Q99758 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC20.94■□□□□ 0.94
ABCA3Q99758 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.94■□□□□ 0.94
ABCA3Q99758 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC20.94■□□□□ 0.94
ABCA3Q99758 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 AC105020.1-201ENST00000435356 2205 ntBASIC20.94■□□□□ 0.94
ABCA3Q99758 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ABCA3Q99758 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 NEFHP1-201ENST00000412845 2629 ntBASIC20.93■□□□□ 0.94
ABCA3Q99758 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC20.93■□□□□ 0.94
ABCA3Q99758 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 GHSR-202ENST00000427970 912 ntBASIC20.93■□□□□ 0.94
ABCA3Q99758 EIF3FP3-201ENST00000434851 1086 ntBASIC20.93■□□□□ 0.94
ABCA3Q99758 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
ABCA3Q99758 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
ABCA3Q99758 AC132938.4-201ENST00000623835 848 ntBASIC20.93■□□□□ 0.94
ABCA3Q99758 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC20.93■□□□□ 0.94
ABCA3Q99758 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ABCA3Q99758 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms