Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 AL139010.1-201ENST00000454878 894 ntBASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 AC119751.2-201ENST00000504529 210 ntBASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 AC092337.1-201ENST00000568699 1129 ntBASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 AC133552.6-201ENST00000613406 534 ntBASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 AL033527.4-201ENST00000641026 673 ntBASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.39■□□□□ 0.05
SLC46A1Q96NT5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 PCGF3-213ENST00000620529 1899 ntBASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 LINC01144-201ENST00000626198 1710 ntBASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 TMEM14DP-201ENST00000422205 345 ntBASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 KRT223P-202ENST00000449164 1292 ntBASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 WFDC1-204ENST00000613603 549 ntBASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 MIR6775-201ENST00000617557 69 ntBASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC46A1Q96NT5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 CA12-203ENST00000422263 2556 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.37■□□□□ 0.05
SLC46A1Q96NT5 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms