Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 MEIS3P1-201ENST00000495167 958 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 API5-211ENST00000534695 560 ntTSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 CR383656.12-201ENST00000549567 513 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AC007541.1-201ENST00000570282 1469 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 AC018695.7-201ENST00000624587 2492 ntBASIC13.15□□□□□ -0.3
ZNF48Q96MX3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.15□□□□□ -0.3
ZNF48Q96MX3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
ZNF48Q96MX3 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 GNAQP1-201ENST00000444815 1067 ntBASIC13.14□□□□□ -0.31
ZNF48Q96MX3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 AC135586.1-201ENST00000539323 574 ntBASIC13.14□□□□□ -0.31
ZNF48Q96MX3 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 AL512361.1-201ENST00000554200 418 ntBASIC13.14□□□□□ -0.31
ZNF48Q96MX3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 AC004790.1-201ENST00000612686 536 ntBASIC13.14□□□□□ -0.31
ZNF48Q96MX3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 OR6D1P-203ENST00000641209 4860 ntBASIC13.14□□□□□ -0.31
ZNF48Q96MX3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ZNF48Q96MX3 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms