Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC19.35■□□□□ 0.69
SNED1Q8TER0 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SNED1Q8TER0 AIRN-201ENST00000601203 4374 ntBASIC19.35■□□□□ 0.69
SNED1Q8TER0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 DRD5P1-201ENST00000456605 1438 ntBASIC19.34■□□□□ 0.69
SNED1Q8TER0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AC006001.1-201ENST00000325130 474 ntBASIC19.34■□□□□ 0.69
SNED1Q8TER0 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AC007969.1-201ENST00000433675 447 ntBASIC19.34■□□□□ 0.69
SNED1Q8TER0 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AL118558.3-201ENST00000607414 1079 ntBASIC19.34■□□□□ 0.69
SNED1Q8TER0 AC107373.2-201ENST00000607735 490 ntBASIC19.34■□□□□ 0.69
SNED1Q8TER0 AL021578.1-201ENST00000613646 709 ntBASIC19.34■□□□□ 0.69
SNED1Q8TER0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SNED1Q8TER0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SNED1Q8TER0 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNED1Q8TER0 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNED1Q8TER0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC19.33■□□□□ 0.69
SNED1Q8TER0 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNED1Q8TER0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNED1Q8TER0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNED1Q8TER0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC19.33■□□□□ 0.69
SNED1Q8TER0 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SNED1Q8TER0 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SNED1Q8TER0 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
SNED1Q8TER0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SNED1Q8TER0 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
SNED1Q8TER0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.33■□□□□ 0.68
SNED1Q8TER0 AC026471.1-201ENST00000564629 3026 ntBASIC19.33■□□□□ 0.68
SNED1Q8TER0 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 KRT18P43-201ENST00000469825 1281 ntBASIC19.33■□□□□ 0.68
SNED1Q8TER0 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.33■□□□□ 0.68
SNED1Q8TER0 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.33■□□□□ 0.68
SNED1Q8TER0 AL008638.5-201ENST00000623814 1298 ntBASIC19.33■□□□□ 0.68
SNED1Q8TER0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC19.33■□□□□ 0.68
SNED1Q8TER0 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SNED1Q8TER0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 AC092506.1-202ENST00000401022 528 ntBASIC19.32■□□□□ 0.68
SNED1Q8TER0 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SNED1Q8TER0 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 IGHJ2P-201ENST00000454480 60 ntBASIC19.32■□□□□ 0.68
SNED1Q8TER0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 GAPDHP40-201ENST00000505218 1006 ntBASIC19.32■□□□□ 0.68
SNED1Q8TER0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SNED1Q8TER0 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms