Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 ABCD1P5-201ENST00000445663 754 ntBASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 BX005266.1-201ENST00000473402 457 ntBASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 DUX4L26-201ENST00000489078 1255 ntBASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 AC087641.1-201ENST00000557561 1021 ntBASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 RN7SL850P-201ENST00000579959 291 ntBASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 Z69720.1-201ENST00000601483 472 ntBASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 AC232323.1-201ENST00000540724 2099 ntBASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 REXO1L5P-201ENST00000622260 2098 ntBASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 AL353732.1-201ENST00000569618 1459 ntBASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.81□□□□□ -0.04
CNIH3Q8TBE1 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 RCN1P1-201ENST00000400413 996 ntBASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CNIH3Q8TBE1 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms