Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
BEST4Q8NFU0 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 KRT17P6-201ENST00000453795 1220 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC010331.1-201ENST00000611423 582 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC114341.1-201ENST00000618070 349 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC073592.4-201ENST00000623827 446 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC016734.2-201ENST00000624325 1377 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 KRT8P39-201ENST00000396270 1433 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 NSUN5P1-202ENST00000421140 1535 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 NSUN5P2-203ENST00000457352 1529 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC020658.6-201ENST00000623564 1870 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 AC007191.1-201ENST00000623179 2995 ntBASIC14.03□□□□□ -0.16
BEST4Q8NFU0 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
BEST4Q8NFU0 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 OR2I1P-209ENST00000641730 5365 ntBASIC14.02□□□□□ -0.16
BEST4Q8NFU0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 AC079776.2-201ENST00000641154 1609 ntBASIC14.02□□□□□ -0.16
BEST4Q8NFU0 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
BEST4Q8NFU0 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 POU5F1P6-201ENST00000466990 990 ntBASIC14.02□□□□□ -0.17
BEST4Q8NFU0 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
BEST4Q8NFU0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms