Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC148Q8NFR7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 AL139400.1-201ENST00000366220 510 ntBASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC148Q8NFR7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AP001282.1-201ENST00000531301 1499 ntBASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC109322.1-201ENST00000524499 1264 ntBASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC069262.1-201ENST00000539058 672 ntBASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC025678.2-201ENST00000562061 970 ntBASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC004449.1-201ENST00000564240 433 ntBASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC007967.4-201ENST00000614700 386 ntBASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 AC026691.1-201ENST00000602502 2017 ntBASIC18.61■□□□□ 0.57
CCDC148Q8NFR7 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.6■□□□□ 0.57
CCDC148Q8NFR7 CNN2P2-201ENST00000443536 909 ntBASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms