Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
SIMC1Q8NDZ2 AL592424.1-201ENST00000563624 1536 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 AKAP8P1-201ENST00000434743 1349 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 DNAJB3-201ENST00000446806 729 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 SPDYE11-202ENST00000450699 704 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 DHDH-204ENST00000523250 634 ntTSL 5 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 SPDYE9P-201ENST00000570642 692 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 AC027307.2-201ENST00000591252 911 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 LINC02084-201ENST00000606069 1096 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 SPDYE10P-202ENST00000612005 668 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 SPDYE8P-202ENST00000612377 668 ntBASIC15.27■□□□□ 0.04
SIMC1Q8NDZ2 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 PAUPAR-201ENST00000630360 2965 ntBASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
SIMC1Q8NDZ2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 DBET-201ENST00000630918 3363 ntBASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 AC022145.2-201ENST00000598203 171 ntBASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SIMC1Q8NDZ2 AC105339.1-204ENST00000636249 355 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms