Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.23□□□□□ -0.29
LRTM2Q8N967 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
LRTM2Q8N967 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.23□□□□□ -0.29
LRTM2Q8N967 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.23□□□□□ -0.29
LRTM2Q8N967 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.23□□□□□ -0.29
LRTM2Q8N967 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LRTM2Q8N967 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 WASH6P-202ENST00000359512 1437 ntBASIC13.22□□□□□ -0.29
LRTM2Q8N967 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 AC091951.1-201ENST00000512854 2465 ntBASIC13.22□□□□□ -0.29
LRTM2Q8N967 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 AP000867.3-201ENST00000524675 377 ntBASIC13.22□□□□□ -0.29
LRTM2Q8N967 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 IGHV3OR16-7-201ENST00000604106 360 ntBASIC13.22□□□□□ -0.29
LRTM2Q8N967 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.22□□□□□ -0.29
LRTM2Q8N967 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC13.22□□□□□ -0.29
LRTM2Q8N967 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LRTM2Q8N967 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 AC006504.4-201ENST00000592118 1568 ntBASIC13.21□□□□□ -0.29
LRTM2Q8N967 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 EMD-201ENST00000369835 966 ntTSL 3 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 AC093827.2-201ENST00000512654 315 ntBASIC13.21□□□□□ -0.29
LRTM2Q8N967 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 AC066615.1-201ENST00000640911 628 ntBASIC13.21□□□□□ -0.29
LRTM2Q8N967 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
LRTM2Q8N967 AC092127.1-201ENST00000567093 3455 ntBASIC13.21□□□□□ -0.29
LRTM2Q8N967 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.21□□□□□ -0.29
LRTM2Q8N967 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.3
LRTM2Q8N967 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRTM2Q8N967 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.21□□□□□ -0.3
LRTM2Q8N967 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRTM2Q8N967 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.21□□□□□ -0.3
LRTM2Q8N967 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRTM2Q8N967 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRTM2Q8N967 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.21□□□□□ -0.3
LRTM2Q8N967 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LRTM2Q8N967 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms