Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PAF1Q8N7H5 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 AC004449.1-201ENST00000564240 433 ntBASIC16.65■□□□□ 0.26
PAF1Q8N7H5 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 AP001160.2-201ENST00000596071 487 ntBASIC16.65■□□□□ 0.26
PAF1Q8N7H5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 AL513210.1-201ENST00000629608 234 ntBASIC16.65■□□□□ 0.26
PAF1Q8N7H5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.65■□□□□ 0.26
PAF1Q8N7H5 GGT4P-201ENST00000623672 1708 ntBASIC16.65■□□□□ 0.26
PAF1Q8N7H5 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PAF1Q8N7H5 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.64■□□□□ 0.26
PAF1Q8N7H5 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.64■□□□□ 0.26
PAF1Q8N7H5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 ADH5P3-201ENST00000433842 1137 ntBASIC16.64■□□□□ 0.25
PAF1Q8N7H5 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 AC243562.1-201ENST00000560672 389 ntBASIC16.64■□□□□ 0.25
PAF1Q8N7H5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 AC008267.7-201ENST00000624570 1194 ntBASIC16.64■□□□□ 0.25
PAF1Q8N7H5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.64■□□□□ 0.25
PAF1Q8N7H5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.64■□□□□ 0.25
PAF1Q8N7H5 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms